Washington University Department of Biology

Faculty Publications - Calendar Year 2000

  1. Abe, M., E. D. Herzog, and G. D. Block. 2000. Lithium lengthens the circadian period of individual suprachiasmatic nucleus neurons. Neuroreport 11: 3261-3264.
  2. Allen, G. 2000. The biological basis of crime:  An historical and methodological study. Hist Stud Phys Biol Sci 31: 183-222.
  3. Allen, G. 2000. The Reception of Mendelism in the United States, 1900-1930. Comptes Rendu de l'Academie des Sciences 323: 1081-1088.
  4. Beckett, C. S., J.A. Loughman, K. A. Karberg, G. M. Donato, W. E. Goldman, and Kranz, R. G. 2000. Four genes are required for the system II cytochrome c biogenesis pathway in Bordetella pertussis, a unique bacterial model. Mol. Microbiol. 38: 465-481.
  5. Belanger, K. D., and R. S. Quatrano. 2000. Membrane recycling during asymmetric tip growth and cell plate formation in Fucus zygotes. Protoplasma 212: 24-37.
  6. Belanger, K. D., and R. S. Quatrano. 2000. Polarity: The role of localized secretion. Curr Opin Pl Biol 3: 67-72.
  7. Butler, M. A., T. W. Schoener, and J. B. Losos. 2000. The relationship between sexual size dimorphism and habitat use in Greater Antillean Anolis lizards. Evolution 54: 259-272.
  8. Cabral, G. B., L. J. C. B. Carvalho, and B. A. Schaal. 2000. The formation of storage roots in cassava. Cassava Biotechnology Proceedings: 345-356.
  9. Carvalho, L. J. C. B., B. A. Schaal, and W. M. Fukuda. 2000. Morphological descriptors and RAPD markers used to assess the genetic diversity of cassava (Manihot esculenta Cranta). Cassava Biotechnology Proceedings: 51-54.
  10. Chalk, R. K. F., T. L. Thomas, R. S. Quatrano, and C. D. Rock. 2000. The genes ABI1 and ABI2 are involved in abscisic acid- and drought-inducible expression of the Daucus carota L. Dc3 promoter in guard cells of transgenic Arabidopsis thaliana L. Heynh. Planta 210: 875-883.
  11. Chen, Z., A. P. Kloek, J. Boch, F. Katagiri, and B. N. Kunkel. 2000. The Pseudomonas syringae avrRPt2 gene product functions inside plant cells to promote pathogen virulence. Mol Plant-Microbe Interact 13: 1312-1321.
  12. Chiang, T.-Y., Schaal, B.A. 2000. The internal transcribed spacer 2 region of the nuclear ribosomal Dna and the pylogeny of the moss family Hylocomiaceae. Plant. Syst. Evol. 224: 127-137.
  13. Cho, Y. S., H. B. Pakrasi, and J. Whitmarsh. 2000. Cytochrome cM from Synechocystis 6803: detection in cells, expression in Escherichia coli, purification and physical characterization. Eur J Biochem 267: 1067-1074.
  14. Chowdhury, S. A., and N. Suga. 2000. Reorganization of the frequency map of the primary auditory cortex evoked by focal cortical electrical stimulation in the big brown bat. J Neurophysiol 83: 1856-1863.
  15. Collin-Osdoby, P., L. Rothe, F. Anderson, and P. Osdoby. 2000. Decreased nitric oxide levels promote osteoclast formation and bone resorption in chick bone marrow and isolated osteoclast cultures in vitro as well as in vivo on the chick chorioallantoic membrane in conjunction with neangiogenesis. J Bone Min Res 15: 474-488.
  16. Cruzan, M. B., and A. R. Templeton. 2000. Paleoecology and coalescence: Phylogeographic analysis of hypotheses from the fossil record. Trends Evol. Ecol 15 (12): 491-496.
  17. Curtiss III, R., S. Blower, K. Cooper, D. Russell, S. Silverstein, and L. Young. 2000. Leprosy research in the post-genome era: Workshop. Int. J. Lepr 68: 492-503.
  18. Dominique Durand, J., E. Unlu, I. Doadrio, S. Pipoyan, and A. R. Templeton. 2000. Origin, radiation, dispersion and allopatric hybridization in the chub Leuciscus cephalus. Proc. R. Sco. Lond B267: 1687-1697.
  19. Dozois, C. M., M. Dho-Moulin, A. Brée, J. M. Fairbrother, C. Desautels, and R. Curtiss III. 2000. Relationship between the Tsh autotransporter and pathogenicity of avian Escherichia coli, and localization and analysis of the tsh genetic region. Infection Immunity 68: 4145-4154.
  20. Duncan, I. 2000. Drosophila melanogaster: Genetic portrait of the fruit fly. Pages 702-730. Genetics: From Genes to Genomes. L. H. Hartwell et al., McGraw-Hill.
  21. Earhart, G. M., and P. S. G. Stein. 2000. Scratch-swim hybrids in the spinal turtle: Blending of rostral scratch and forward swim. J Neurophysiol 83: 156-165.
  22. Earhart, G. M., and P. S. G. Stein. 2000. Step, swim and scratch motor patterns in the turtle. J Neurophysiol 84: 2181-2190.
  23. Eissenberg, J. C., and S. C. R. Elgin. 2000. The HP1 protein family:  getting a grip on chromatin. Curr Opin Genet. Develop 10: 204-210.
  24. Elgin, S. C. R., and J. J. Workman. 2000. Chromatin Structure and Gene Expression. Oxford University Press, New York.
  25. Farkas, G., Leibovitch, B.A., Elgin, S.C.R. 2000. Chromatin organization and transcriptional control of gene expression in Drosophila. Gene 253: 117-136.
  26. Gao, E., and N. Suga. 2000. Experience-dependent plasticity in the auditory cortex and the inferior colliculus of bats: Role of the corticofugal system. Proc Natl Acad Sci USA 97: 8081-8086.
  27. Gens, J. S., M. Fujiki, and B. G. Pickard. 2000. Arabinogalactan protein and wall associated kinase in a plasmalemmal reticulum with specialized vertices. Protoplasma 212: 115-134.
  28. Goodenough, U. W. 2000. Causality and subjectivity in the religious quest. Zygon 35: 725-734.
  29. Goodenough, U. W. 2000. Reflections on science and technology. Zygon 35: 1-8.
  30. Goodenough, U. W. 2000. Reflections on scientific and religious metaphor. Zygon 35: 203-210.
  31. Goodenough, U. W. 2000. Religiopoiesis. Zygon 35: 352-355.
  32. Hagenbeek, D., R. S. Quatrano, and C. D. Rock. 2000. Trivalent ions activate abscisic acid-inducible promoters through an abi1-dependent pathway in rice protoplasts. Pl Physiol 123: 1553-1560.
  33. Herzog, E. D., Grace, M.S., Williamson, J., Harrer, C., Block, G.D. 2000. The role of Clock in developmental expression of neuropeptides in the suprachiasmatic nucleus. J Comp Neurol 424: 86-98.
  34. Hickman Jr., C. P., L. S. Roberts, and A. Larson. 2000. Animal Diversity. McGraw-Hill.
  35. Honeyman, A. L., and R. Curtiss III. 2000. The mannitol-specific enzyme II (mtlA) gene and the mtlR gene of the PTS of Streptococcus mutans. Microbiol 146: 1565-1572.

 

  1. Ivanchenko, M., Z. Vejlupkova, R. Quatrano, and J. E. Fowler. 2000. Maize ROP7 GTPase contains a unique, CaaX box-independent plasma membrane targeting signal. Plant J 24: 79-90.
  2. Ivleva, N. B., S. V. Shestakov, and H. B. Pakrasi. 2000. The carboxyl-terminal extension of the precursor D1 protein of Photosystem II is required for optimal photosynthetic performance of the cyanobacterium Synechocystis sp. PCC 6803. Pl Physiol 124: 1403-1411.
  3. Kloek, A. P., D. M. Brooks, and B. N. Kunkel. 2000. A dsbA mutant of Pseudomonas syringae exhibits reduced virulence and partial impairment of type III secretion. Mol Plant Pathol 1: 139.
  4. Kloek, A. P., Z. Chen, M. Lim, and B. N. Kunkel. 2000. The Pseudomonas syringae avrRpt2 gene encodes a protein that functions inside plant cells to promote pathogen virulence in P. J. G. M. De Wit, T. Bisseling, and W. J. Stiekema, eds. Biology of Plant-Microbe Interactions. International Society for Molecular Plant-Microbe Interactions, St. Paul, MN, USA.
  5. Kopp, A., I. Duncan, and S. B. Carroll. 2000. Genetic control and evolution of sexually dimorphic characters in Drosophila. Nature Conservation Quarterly 408: 553-559.
  6. Leal, M., and Losos, J.B. 2000. Natural history of the Cuban lizard Chamaeleolis barbatus. J. Herp 34: 318-322.
  7. Levin, P. A., and R. Losick. 2000. Asymmetric cell division in Bacillus subtilis. Pages 167-189 in Y. Brun and L. Shimkets, eds. Prokaryotic Development. American Society for Microbiology Press, Washington, D.C.
  8. Lewis, W. H. 2000. Ethnopharmacology and the search for new therapeutics. Pages 74-96 in P. E. Minnis and W. J. Elisens, eds. Biodiversity and Native America. University of Oklahoma Press, Norman, OK.
  9. Lewis, W. H. 2000. Sixty medicinal plants from the Peruvian Amazon: Ecology, ethnomedicine and bioactivity by Desmarchelier C. and Schaus, F.W. J Nat Prod 63: 1596-1597.
  10. Losos, J. B., and Schluter, D. 2000. Analysis of an evolutionary specied-area relationship. Nature 408: 847-850.
  11. Losos, J. B. 2000. Review: Ecological character displacement and the study of adaptation. Proc Natl Acad Sci U.S.A 97: 5693-5695.
  12. Losos, J. B., D. A. Creer, D. Glossip, R. Goellner, A. Hampton, G. Roberts, N. Haskell, P. Taylor, and J. Etling. 2000. Evolutionary implications of phenotypic plasticity in the hindlimb of the lizard Anolis sagrei. Evolution 54: 301-305.
  13. Macey, J. R., J. A. Schulte II, H. G. Kami, N. B. Ananjeva, A. Larson, and T. J. Papenfuss. 2000. Testing hypotheses of vicariance in the agamid lizard Laudakia caucasia from mountain ranges on the northern Iranian Plateau. Mol Phylogen Evol 14: 479-483.
  14. Macey, J. R., J. A. Schulte II, and A. Larson. 2000. Evolution and information content of mitochondrial genomic structural features illustrated with acrodont lizards. Syst Biol 49: 257-277.
  15. Macey, J. R., J. A. Schulte II, A. Larson, N. B. Ananjeva, Y. Wang, R. Pethiyagoda, N. Rastegar-Pouyani, and T. J. Papenfuss. 2000. Evaluating trans-Tethys migration: An example using acrodont lizard phylogenetics. Syst Biol 49: 233-256.

 

  1. Matos, J. A., and B. A. Schaal. 2000. Chloroplast evolution in the Pinus montezumae complex: a coalescent approach to hybridization. Evolution 54: 1218-1233.
  2. Maurer, J. J., T. A. Doggett, L. Burns-Keliher, and R. Curtiss III. 2000. Expression of the rfa, LPS biosynthesis promoter in Salmonella typhimurium during invasion of intestinal epithelial cells. Curr. Microbiol 41: 172-176.
  3. Neff, M. M., C. Fankhauser, and J. Chory. 2000. Light: an indicator of time and place. Genes Dev 14: 257-271.
  4. Ng, W.-O., and H. B. Pakrasi. 2000. DNA photolyase homologues are the major UV resistance factors in Synechocystis sp. PCC 6803. Mol Gen Genet 264: 924-930.
  5. Ng, W.-O., R. Zentella, Y. Wang, J.-S. Taylor, and H. B. Pakrasi. 2000. phrA, the major photoreactivating factor in the cyanobacterium Synechocystis sp. PCC 6803 codes for a cyclobutane pyrimidine dimer specific DNA photolyase. Arch Microbiol 173: 412-417.
  6. Ohkawa, H., H. B. Pakrasi, and T. Ogawa. 2000. Two types of functionally distinct NAD(P)H dehydrogenases in Synechocystis sp. strain PCC 6803. J Biol Chem 275: 31630-31634.
  7. Olsen, K., Schaal, B., Hernandez, M. 2000. A survey of DNA sequence variation in cassava and other Manihot species. Cassava Biotechnology Proceedings: 129-134.
  8. Phillips, C. A., G. Suau, and A. R. Templeton. 2000. Effects of holocene climate fluctuation on mitochondrial DNA variation in the ringed salamander, Ambystoma annulatum. Copeia: 542-545.
  9. Pikaard, C. S. 2000. The Arabidopsis Genome Initiative Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408: 796-815.
  10. Pikaard, C. S. 2000. Nucleolar dominance: uniparental gene silencing on a multi-megabase scale in hybrids. Special Epigenetics issue of Plant Molecular Biology 43: 163-177.
  11. Posada, D., K. A. Crandall, and A. R. Templeton. 2000. GeoDis: a program for the cladistic nested analysis of the geographical distribution of genetic haplotypes. Mol Ecol 9: 487-488.
  12. Ruvinsky, I., Gibson-Brown, J. J. 2000. Genetic and developmental bases of serial homology in vertebrate limb evolution. Development 127: 5233-5244.
  13. Ruvinsky, I., Silver, L.M., Gibson-Brown, J. J. 2000. Phylogenetic analysis of T-box genes demonstrates the importance of amphioxus for understanding evolution of the vertebrate genome. Genetics 156: 1249-1257.
  14. Saez-Vasquez, J., and C. S. Pikaard. 2000. RNA polymerase I holoenzyme-promoter interactions. Biol. Chem. 275: 37173-37180.
  15. Schaal, B., and K. Olsen. 2000. Gene genealogies and variation within plant populations. Proc. Natl. Acad. Sci. 97: 7024-7029.
  16. Schulte II, J. A., J. R. Macey, R. Espinoza, and A. Larson. 2000. Phylogenetic relationships in the iguanid lizard genus Liolaemus: Multiple origins of viviparous reproduction and a phylogenetic evaluation of Andean vicariance. Biological Journal of the Linnean Society 69: 75-102.

 

 

 

  1. Setterdahl, A. T., B. S. Goldman, M. Hirasawa, P. Jacquot, A. J. Smith, R. G. Kranz, and D. B. Knaff. 2000. Oxidation-reduction properties of two disulfide-containing proteins of the Rhodobacter capsulatus cytochrome c biogenesis system. Biochem 39: 10172-10176.
  2. Sivamani, E., A. Bahieldin, J. M. Wraith, T. Al-Nemi, W. E. Dyer, T.-H. D. Ho, and R. Qu. 2000. Improved biomass productivity and water use efficiency under drought conditions in transgenic wheat constitutively expressing the barley HvA1 Gene. J Plant Science 155: 1-9.
  3. Stathopoulos, C., D. R. Hendrixson, D. G. Thanassi, S. J. Hultgren, J. W. St. Geme III, and R. Curtiss III. 2000. Secretion of virulence determinants by the general secretory pathway in Gram-negative pathogens:  an evolving story. Microbes Infection 2: 1061-1072.
  4. Stokes, T. L., and E. J. Richards. 2000. Mum's the word.  Mom and modifiers of transcriptional gene silencing. Plant Cell 12: 1003-1006.
  5. Suga, N. 2000. Basic acoustic patterns and neural mechanisms shared by humans and animals for auditory perception: A neuroethologist's view. Pages 31-38 in S. Greenberg and W. A. Ainsworth, eds. Listening to Speech: An Auditory Perspective. Oxford University Press, New York.
  6. Suga, N., E. Gao, Y. Zhang, X. Ma, and J. F. Olsen. 2000. The corticofugal system for hearing: Recent progress. Proc Natl Acad Sci U.S.A 97: 11807-11814.
  7. Sun, F.-L., Cuaycong, M.H., Craig, C.A., Wallrath, L.L., Locke, J., and Elgin, S.C.R. 2000. The fourth chromosome of Drosophila melanogaster: Interspersed euchromatic and heterochromatic domains. Proc. Natl. Acad. Sci. USA. 97: 5340-5345.
  8. Suzuki, L., J. P. Woessner, H. Uchida, H. Kuroiwa, Y. Yuasa, S. Waffenschmidt, U. Goodenough, and T. Kuroiwa. 2000. A zygote-specific protein with hydroxyproline-rich glycoprotein domains and lectin-like domains involved in the assembly of the cell wall of Chlamydomonas reinhardtii (Chlorophyta). J Phycol 36: 571-583.
  9. Templeton, A. R. 2000. Applying genetics to species conservation: A review of "genetics and the extinction of species". Pages 539-540 in L. F. Landweber and A. P. Dobson, eds. BioSci.
  10. Templeton, A. R. 2000. Epistasis and complex traits. Pages 41-57 in J. B. Wolf, E. D. Brodie III, and M. J. Wade, eds. Epistasis and the Evolutionary Process. Oxford University Press, Oxford.
  11. Templeton, A. R., A. G. Clark, K. M. Weiss, C. A. Nickerson, E. Boerwinkle, and C. F. Sing. 2000. Cladistic structure within the human Lipoprotein Lipase gene and its implications for phenotypic association studies. Genetics 156: 1259-1275.
  12. Templeton, A. R., A. G. Clark, K. M. Weiss, D. A. Nickerson, J. Stengard, E. Boerwinkle, and C. F. Sing. 2000. Recombinational and mutational hotspots within the human Lipoprotein Lipase gene. Am J Hum Genet 66: 69-83.
  13. Templeton, A. R., S. D. Maskas, and M. B. Cruzan. 2000. Gene Trees:  A powerful tool for exploring the evolutionary biology of species and speciation. Plant Spec Biol 15: 211-222.
  14. Thach, R. E. 2000. Downsizing Ph.D. programs at Washington University. MAGS Annual Meeting.
  15. Weigel, D., J. H. Ahn, M. A. Blazquez, J. Borevitz, S. K. Christensen, C. Fankhauser, C. Ferrandiz, I. Kardailsky, M. M. Neff, J. T. Nguyen, S. Sato, Z. Wang, Y. Xia, R. A. Dixon, M. J. Harrison, C. J. Lamb, M. F. Yanofsky, and J. Chory. 2000. Activation tagging in Arabidopsis. Pl Physiol 122: 1003-1013.
  16. Zak, E., and H. B. Pakrasi. 2000. The BtpA protein stabilizes the reaction center proteins for Photosystem I in the cyanobacterium Synechocystis sp. PCC 6803. Pl Physiol 123: 215-222.
  17. Zhang, J., N. Y. Klueva, Z. Wang, R. Wu, T.-H. D. Ho, and H. T. Nguyen. 2000. Genetic engineering for abiotic stress resistance in crop plants. Pages 108-114. In Vitro Cell Dev Biol - Plant.
  18. Zhang, Y., and N. Suga. 2000. Modulation of responses and frequency tuning of thalamic and collicular neurons by cortical activation in mustached bats. J Neurophysiol 84: 325-333.

 

PUBLICATIONS IN PRESS

  1. Hallmann, A., and D. L. Kirk. 2000, in press. The developmentally regulated ECM glycoprotein ISG plays an essential role in organizing the ECM and orienting the cells of Volvox. J Cell Sci.
  2. Kirk, D. L. 2000, in press. Volvox as a model system for studying the ontogeny and phylogeny of muticellularity and cellular differentiation. J Plant Growth Reg.